We just had a failure. We couldn't restore a prior version of the AC database. The database can be restored at AC but not on the practice server.
We were trying to get the report that says what files are missing. In order to do that we need to restore back to before the bad links were fixed.
Tomorrow I will write run XCOPY with the switches set to tell me what files would be copied from the ones I found to the II. XCOPY will be set to ignore matches.
We can then use the AC utility to repair the links to new files in the folders.
I will also be talking with Craig tomorrow to see if he has another rabbit up his sleeve.
Thank you all for the luck you have wished us and please wish us more!